STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OSZ78275.1Protease; Derived by automated computational analysis using gene prediction method: Protein Homology. (310 aa)    
Predicted Functional Partners:
ftsH
AAA family ATPase; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins; Belongs to the AAA ATPase family. In the central section; belongs to the AAA ATPase family.
   
 0.975
OSZ82334.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.726
OSZ78274.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.569
OSZ81739.1
Arc family DNA binding domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.536
purA
Adenylosuccinate synthase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family.
  
    0.530
OSZ82137.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.463
OSZ82138.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.463
OSZ77987.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.463
OSZ78435.1
Rhomboid family intramembrane serine protease; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.463
OSZ82580.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   0.452
Your Current Organism:
Chitinophagaceae bacterium IBVUCB1
NCBI taxonomy Id: 1985173
Other names: C. bacterium IBVUCB1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.