STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OSZ79348.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (191 aa)    
Predicted Functional Partners:
OSZ79349.1
Riboflavin synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.746
OSZ79350.1
FAD-dependent oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.550
rpsU
30S ribosomal protein S21; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial ribosomal protein bS21 family.
       0.530
OSZ79351.1
Group 1 glycosyl transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.479
OSZ79346.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the 'phage' integrase family.
       0.429
Your Current Organism:
Chitinophagaceae bacterium IBVUCB1
NCBI taxonomy Id: 1985173
Other names: C. bacterium IBVUCB1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.