STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OSZ80580.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (168 aa)    
Predicted Functional Partners:
OSZ77937.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0337 (CsbD) family.
 
    0.849
OSZ76950.1
TIGR01777 family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.717
OSZ80401.1
GNAT family N-acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.625
OSZ77824.1
Rubrerythrin family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.557
OSZ81425.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.548
OSZ81490.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.532
OSZ80846.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.527
OSZ81402.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.526
OSZ77101.1
NAD(P)-dependent oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.526
katE
Catalase HPII; Serves to protect cells from the toxic effects of hydrogen peroxide.
 
    0.470
Your Current Organism:
Chitinophagaceae bacterium IBVUCB2
NCBI taxonomy Id: 1985174
Other names: C. bacterium IBVUCB2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.