STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDP18227.1Phosphocarrier protein. (90 aa)    
Predicted Functional Partners:
SDO79778.1
Phosphocarrier protein FPr; Belongs to the PEP-utilizing enzyme family.
 
 0.999
SDO53755.1
Phosphotransferase system, enzyme I, PtsP; Belongs to the PEP-utilizing enzyme family.
  
 
 0.995
SDO79723.1
PTS system, fructose-specific IIC component.
 
 
 0.983
SDP18277.1
PTS IIA-like nitrogen-regulatory protein PtsN.
 
 
 0.983
SDO05783.1
LacI family transcriptional regulator, gluconate utilization system Gnt-I transcriptional repressor.
 
 
 
 0.932
SDO79803.1
Transcriptional regulator, LacI family.
   
 
 0.922
SDP09478.1
Transcriptional regulator, LacI family.
   
 
 0.922
SDO60573.1
Protein of unknown function.
    
 0.845
SDP18250.1
UPF0042 nucleotide-binding protein; Displays ATPase and GTPase activities.
  
  
 0.835
SDO79751.1
1-phosphofructokinase; Belongs to the carbohydrate kinase PfkB family.
 
 
 0.821
Your Current Organism:
Pseudomonas jinjuensis
NCBI taxonomy Id: 198616
Other names: JCM 21621, KACC 10760, LMG 21316, LMG:21316, NBRC 103047, P. jinjuensis, Pseudomonas jinjuensis Kwon et al. 2003, Pseudomonas sp. KACC 10758, Pseudomonas sp. KACC 10760, Pseudomonas sp. Pss 14, Pseudomonas sp. Pss 26, strain Pss 26
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