STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ANI00134.1Aldo/keto reductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (277 aa)    
Predicted Functional Partners:
ANI00133.1
FAD-binding dehydrogenase; Proposed role in polysaccahride synthesis; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.780
ANH98173.1
NADP-dependent oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
0.603
ANI00349.1
PrkA family serine protein kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.573
ANH99928.1
Aldo/keto reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
0.525
ANH97565.1
Non-ribosomal peptide synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.524
ANH98469.1
Methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.
   
 0.523
ANI00132.1
IclR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.521
ANH96277.1
Aldo/keto reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
0.470
ANI00135.1
Metallopeptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.449
ANI00136.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.449
Your Current Organism:
Pseudomonas koreensis
NCBI taxonomy Id: 198620
Other names: Arthrobacter sp. BDR2P1B1-M, Bacillus sp. BDR2P1B1, CCUG 51519, DSM 16610, JCM 14769, KACC 10848, LMG 21318, LMG:21318, P. koreensis, Pseudomonas koreensis Kwon et al. 2003, Pseudomonas sp. C9SED2, Pseudomonas sp. CALLA-IHBT-4, Pseudomonas sp. CRS05-R5, Pseudomonas sp. KACC 10848, Pseudomonas sp. KACC 10851, Pseudomonas sp. Ps 1-2, Pseudomonas sp. Ps 9-14, strain Ps 9-14
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