node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ADN00170.1 | amiB | Dda3937_00440 | Dda3937_00437 | Protein involved in (DEPRECATED) molecular function unknown and (DEPRECATED) biological process unknown. | Protein involved in N-acetylmuramoyl-L-alanine amidase activity, peptidoglycan biosynthetic process, peptidoglycan catabolic process and cell wall catabolic process. | 0.517 |
ADN00170.1 | miaA | Dda3937_00440 | Dda3937_00435 | Protein involved in (DEPRECATED) molecular function unknown and (DEPRECATED) biological process unknown. | Delta(2)-isopentenylpyrophosphate tRNA-adenosine transferase; Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A); Belongs to the IPP transferase family. | 0.467 |
ADN00170.1 | mutL | Dda3937_00440 | Dda3937_00436 | Protein involved in (DEPRECATED) molecular function unknown and (DEPRECATED) biological process unknown. | Methyl-directed mismatch repair protein; This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a 'molecular matchmaker', a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex. | 0.467 |
ADN00170.1 | yjeE | Dda3937_00440 | Dda3937_00438 | Protein involved in (DEPRECATED) molecular function unknown and (DEPRECATED) biological process unknown. | ATPase with strong ADP affinity; Protein involved in (DEPRECATED) molecular function unknown and (DEPRECATED) biological process unknown. | 0.517 |
ADN00170.1 | yjeF | Dda3937_00440 | Dda3937_00439 | Protein involved in (DEPRECATED) molecular function unknown and (DEPRECATED) biological process unknown. | Predicted carbohydrate kinase; Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow the repair of [...] | 0.517 |
alr | amiB | Dda3937_03446 | Dda3937_00437 | Alanine racemase 1, PLP-binding, biosynthetic; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family. | Protein involved in N-acetylmuramoyl-L-alanine amidase activity, peptidoglycan biosynthetic process, peptidoglycan catabolic process and cell wall catabolic process. | 0.515 |
alr | yjeE | Dda3937_03446 | Dda3937_00438 | Alanine racemase 1, PLP-binding, biosynthetic; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family. | ATPase with strong ADP affinity; Protein involved in (DEPRECATED) molecular function unknown and (DEPRECATED) biological process unknown. | 0.583 |
amiB | ADN00170.1 | Dda3937_00437 | Dda3937_00440 | Protein involved in N-acetylmuramoyl-L-alanine amidase activity, peptidoglycan biosynthetic process, peptidoglycan catabolic process and cell wall catabolic process. | Protein involved in (DEPRECATED) molecular function unknown and (DEPRECATED) biological process unknown. | 0.517 |
amiB | alr | Dda3937_00437 | Dda3937_03446 | Protein involved in N-acetylmuramoyl-L-alanine amidase activity, peptidoglycan biosynthetic process, peptidoglycan catabolic process and cell wall catabolic process. | Alanine racemase 1, PLP-binding, biosynthetic; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family. | 0.515 |
amiB | miaA | Dda3937_00437 | Dda3937_00435 | Protein involved in N-acetylmuramoyl-L-alanine amidase activity, peptidoglycan biosynthetic process, peptidoglycan catabolic process and cell wall catabolic process. | Delta(2)-isopentenylpyrophosphate tRNA-adenosine transferase; Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A); Belongs to the IPP transferase family. | 0.929 |
amiB | mutL | Dda3937_00437 | Dda3937_00436 | Protein involved in N-acetylmuramoyl-L-alanine amidase activity, peptidoglycan biosynthetic process, peptidoglycan catabolic process and cell wall catabolic process. | Methyl-directed mismatch repair protein; This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a 'molecular matchmaker', a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex. | 0.921 |
amiB | yjeE | Dda3937_00437 | Dda3937_00438 | Protein involved in N-acetylmuramoyl-L-alanine amidase activity, peptidoglycan biosynthetic process, peptidoglycan catabolic process and cell wall catabolic process. | ATPase with strong ADP affinity; Protein involved in (DEPRECATED) molecular function unknown and (DEPRECATED) biological process unknown. | 0.860 |
amiB | yjeF | Dda3937_00437 | Dda3937_00439 | Protein involved in N-acetylmuramoyl-L-alanine amidase activity, peptidoglycan biosynthetic process, peptidoglycan catabolic process and cell wall catabolic process. | Predicted carbohydrate kinase; Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow the repair of [...] | 0.910 |
mfd | mutL | Dda3937_03640 | Dda3937_00436 | Transcription-repair coupling factor; Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site; In the C-terminal section; belongs to the helicase family. RecG subfamily. | Methyl-directed mismatch repair protein; This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a 'molecular matchmaker', a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex. | 0.607 |
mfd | recG | Dda3937_03640 | Dda3937_01125 | Transcription-repair coupling factor; Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site; In the C-terminal section; belongs to the helicase family. RecG subfamily. | ATP-dependent DNA helicase; Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y- DNA); Belongs to the helicase family. RecG subfamily. | 0.536 |
mfd | yeaZ | Dda3937_03640 | Dda3937_03715 | Transcription-repair coupling factor; Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site; In the C-terminal section; belongs to the helicase family. RecG subfamily. | Predicted peptidase; Protein involved in (OBSOLETE) O-sialoglycoprotein endopeptidase activity and proteolysis. | 0.439 |
mfd | yjeE | Dda3937_03640 | Dda3937_00438 | Transcription-repair coupling factor; Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site; In the C-terminal section; belongs to the helicase family. RecG subfamily. | ATPase with strong ADP affinity; Protein involved in (DEPRECATED) molecular function unknown and (DEPRECATED) biological process unknown. | 0.598 |
miaA | ADN00170.1 | Dda3937_00435 | Dda3937_00440 | Delta(2)-isopentenylpyrophosphate tRNA-adenosine transferase; Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A); Belongs to the IPP transferase family. | Protein involved in (DEPRECATED) molecular function unknown and (DEPRECATED) biological process unknown. | 0.467 |
miaA | amiB | Dda3937_00435 | Dda3937_00437 | Delta(2)-isopentenylpyrophosphate tRNA-adenosine transferase; Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A); Belongs to the IPP transferase family. | Protein involved in N-acetylmuramoyl-L-alanine amidase activity, peptidoglycan biosynthetic process, peptidoglycan catabolic process and cell wall catabolic process. | 0.929 |
miaA | mutL | Dda3937_00435 | Dda3937_00436 | Delta(2)-isopentenylpyrophosphate tRNA-adenosine transferase; Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A); Belongs to the IPP transferase family. | Methyl-directed mismatch repair protein; This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a 'molecular matchmaker', a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex. | 0.922 |