STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADN00733.1Pyridine nucleotide-disulfide oxidoreductase family protein; Protein involved in oxidoreductase activity, acting on the CH-NH2 group of donors, NAD or NADP as acceptor, oxidoreductase activity, iron-sulfur cluster binding, electron carrier activity, FAD binding, metabolic process, glutamate biosynthetic process and (OBSOLETE) electron transport. (664 aa)    
Predicted Functional Partners:
gltB
Glutamate synthase, large subunit; Protein involved in glutamate synthase activity, oxidoreductase activity, catalytic activity, glutamate biosynthetic process, nitrogen compound metabolic process and metabolic process.
 
 0.999
hyfG
Hydrogenase 4, subunit; Protein involved in oxidoreductase activity, 4 iron, 4 sulfur cluster binding, ferredoxin hydrogenase activity, nickel ion binding, electron carrier activity, oxidoreductase activity, acting on NADH or NADPH, NAD binding, energy derivation by oxidation of organic compounds and (OBSOLETE) electron transport.
  
 
 0.914
hcr
HCP oxidoreductase, NADH-dependent; Protein involved in (DEPRECATED) molecular function unknown, oxidoreductase activity, electron carrier activity, iron-sulfur cluster binding, (DEPRECATED) biological process unknown and (OBSOLETE) electron transport.
 
 
 0.903
fdhF
Formate dehydrogenase H; This gene does not encode a selenopolypeptide -- aa position 140 is C (Cys), not U (SeCys); Protein involved in (DEPRECATED) electron donor activity, oxidoreductase activity, molybdenum ion binding, formate dehydrogenase activity, anaerobic respiration, fermentation, formate metabolic process and (OBSOLETE) electron transport; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
 
 
 0.853
ADM96950.1
Protein involved in electron carrier activity, oxidoreductase activity, iron-sulfur cluster binding, catalytic activity, thiamin pyrophosphate binding, iron ion binding, oxidoreductase activity, acting on the aldehyde or oxo group of donors, tricarboxylic acid cycle, fermentation and (OBSOLETE) electron transport.
  
 
 0.840
ycbX
Predicted 2Fe-2S cluster-containing protein; Protein involved in (DEPRECATED) molecular function unknown, electron carrier activity, iron-sulfur cluster binding, catalytic activity, molybdenum ion binding, pyridoxal phosphate binding, (DEPRECATED) biological process unknown and (OBSOLETE) electron transport.
   
 0.796
ADN00734.1
Protein involved in electron carrier activity, iron-sulfur cluster binding, anaerobic respiration and (OBSOLETE) electron transport.
   
  
0.793
nifJ
Protein involved in iron ion binding, oxidoreductase activity, acting on the aldehyde or oxo group of donors, oxidoreductase activity, electron carrier activity, iron-sulfur cluster binding, catalytic activity, thiamin pyrophosphate binding, fermentation and (OBSOLETE) electron transport.
  
  
 0.778
fre
Flavin reductase; Protein involved in electron carrier activity, oxidoreductase activity and (OBSOLETE) electron transport.
  
 
 0.776
fdx
[2Fe-2S] ferredoxin; Protein involved in electron carrier activity, 2 iron, 2 sulfur cluster binding, iron-sulfur cluster binding and (OBSOLETE) electron transport.
   
 0.760
Your Current Organism:
Dickeya dadantii
NCBI taxonomy Id: 198628
Other names: D. dadantii 3937, Dickeya dadantii 3937, Dickeya dadantii str. 3937, Dickeya dadantii strain 3937, Erwinia chrysanthemi str. 3937, Pectobacterium chrysanthemi str. 3937
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.