STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADM96474.1Endonuclease/Exonuclease/phosphatase family protein; Protein involved in (DEPRECATED) molecular function unknown and (DEPRECATED) biological process unknown. (380 aa)    
Predicted Functional Partners:
csdA
Cysteine desulfurase; Protein involved in transaminase activity, catalytic activity, pyridoxal phosphate binding and metabolic process.
    
   0.576
sufS
Cysteine desulfurase; Cysteine desulfurases mobilize the sulfur from L-cysteine to yield L-alanine, an essential step in sulfur metabolism for biosynthesis of a variety of sulfur-containing biomolecules. Component of the suf operon, which is activated and required under specific conditions such as oxidative stress and iron limitation. Acts as a potent selenocysteine lyase in vitro, that mobilizes selenium from L- selenocysteine. Selenocysteine lyase activity is however unsure in vivo; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. Csd subfamily.
    
   0.576
fliY
Cystine transporter subunit; Protein involved in (OBSOLETE) ATP-binding cassette (ABC) transporter activity, transporter activity, amino acid catabolic process and transport; Belongs to the bacterial solute-binding protein 3 family.
       0.460
ADM96475.1
Short chain oxidoreductase; Protein involved in (DEPRECATED) molecular function unknown, oxidoreductase activity, (DEPRECATED) biological process unknown and metabolic process; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
       0.447
yecS
Predicted transporter subunit: membrane component of ABC superfamily; Protein involved in (OBSOLETE) ATP-binding cassette (ABC) transporter activity, transporter activity, amino acid catabolic process and transport.
       0.421
Your Current Organism:
Dickeya dadantii
NCBI taxonomy Id: 198628
Other names: D. dadantii 3937, Dickeya dadantii 3937, Dickeya dadantii str. 3937, Dickeya dadantii strain 3937, Erwinia chrysanthemi str. 3937, Pectobacterium chrysanthemi str. 3937
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.