STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fdoIFormate dehydrogenase-O, cytochrome b556 subunit; Protein involved in (DEPRECATED) electron donor activity, formate dehydrogenase activity, anaerobic respiration, cytochrome complex assembly, (OBSOLETE) electron transport and cellular respiration. (211 aa)    
Predicted Functional Partners:
fdoH
Formate dehydrogenase-O, Fe-S subunit; The beta chain is an electron transfer unit containing 4 cysteine clusters involved in the formation of iron-sulfur centers.
 
 0.998
fdoG
Formate dehydrogenase-O, large subunit; This gene does not encode a selenopolypeptide -- aa position 196 is C (Cys), not U (SeCys); Protein involved in (DEPRECATED) electron donor activity, oxidoreductase activity, molybdenum ion binding, formate dehydrogenase activity, anaerobic respiration, (OBSOLETE) electron transport and cellular respiration.
 
 0.997
fdnH
Formate dehydrogenase-N, Fe-S (beta) subunit, nitrate-inducible; The beta chain is an electron transfer unit containing 4 cysteine clusters involved in the formation of iron-sulfur centers.
 
 
 0.932
fdnG
Formate dehydrogenase-N, alpha subunit, nitrate-inducible; Putative aconitate hydratase pseudogene containing single nucleotide deletion, resulting in two open reading frames; Protein involved in (OBSOLETE) ATP-binding cassette (ABC) transporter activity.
 
 
 0.903
yeiG
Putative esterase; Serine hydrolase involved in the detoxification of formaldehyde.
     
  0.900
ADN00322.1
Oxalate decarboxylase oxdD; Protein involved in nutrient reservoir activity and xenobiotic metabolic process.
     
  0.900
ADM99435.1
N-formylglutamate deformylase; Protein involved in amino acid catabolic process.
     
  0.900
purU
Formyltetrahydrofolate deformylase; Catalyzes the hydrolysis of 10-formyltetrahydrofolate (formyl-FH4) to formate and tetrahydrofolate (FH4).
     
  0.900
fdhE
Formate dehydrogenase formation protein; Necessary for formate dehydrogenase activity. Belongs to the FdhE family.
 
  
 0.890
maeB
Protein involved in malic enzyme activity, oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, NAD binding, acyltransferase activity, metal ion binding, malate metabolic process and metabolic process.
   
 
 0.810
Your Current Organism:
Dickeya dadantii
NCBI taxonomy Id: 198628
Other names: D. dadantii 3937, Dickeya dadantii 3937, Dickeya dadantii str. 3937, Dickeya dadantii strain 3937, Erwinia chrysanthemi str. 3937, Pectobacterium chrysanthemi str. 3937
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.