STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADN00533.1Glycosyl transferase, group 1; Protein involved in colanic acid biosynthetic process and biosynthetic process. (374 aa)    
Predicted Functional Partners:
ADN00531.1
Hypothetical protein.
 
  
 0.851
ADN00532.1
ADP-heptose--lipooligosaccharide heptosyltransferase II; Protein involved in transferase activity, lipopolysaccharide core region biosynthetic process and metabolic process.
  
  
 0.792
ADM96751.1
Putative glycosyltransferase protein; Protein involved in biosynthetic process.
  
     0.700
wcaJ
Predicted UDP-glucose lipid carrier transferase; Protein involved in colanic acid biosynthetic process.
 
  
 0.667
ADM96752.1
Alpha-D-GlcNAc alpha-1,2-L-rhamnosyltransferase; Protein involved in biosynthetic process.
 
     0.657
glgB
1,4-alpha-glucan branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.
   
 0.656
ycjY
Protein involved in (DEPRECATED) molecular function unknown and (DEPRECATED) biological process unknown.
   
 
 0.620
ADM97623.1
dTDP-glucose 4,6-dehydratase; Protein involved in racemase and epimerase activity, acting on carbohydrates and derivatives, catalytic activity, coenzyme binding, carbohydrate catabolic process, carbohydrate metabolic process and cellular metabolic process.
 
  
 0.541
rfbC
dTDP-4-dehydrorhamnose 3,5-epimerase; Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4-hexulose. Belongs to the dTDP-4-dehydrorhamnose 3,5-epimerase family.
  
  
 0.529
ugd
UDP-glucose dehydrogenase; Protein involved in (OBSOLETE) cell surface antigen activity, host-interacting, oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, NAD binding, colanic acid biosynthetic process, response to desiccation, nucleotide-sugar biosynthetic process and (OBSOLETE) electron transport.
  
  
 0.497
Your Current Organism:
Dickeya dadantii
NCBI taxonomy Id: 198628
Other names: D. dadantii 3937, Dickeya dadantii 3937, Dickeya dadantii str. 3937, Dickeya dadantii strain 3937, Erwinia chrysanthemi str. 3937, Pectobacterium chrysanthemi str. 3937
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