STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
nifXNitrogenase molybdenum-cofactor synthesis protein NifX; Protein involved in nitrogen compound metabolic process. (155 aa)    
Predicted Functional Partners:
nifN
Nitrogenase molybdenum-cofactor synthesis protein NifN; Protein involved in protein binding, oxidoreductase activity, nitrogenase activity, nitrogen compound metabolic process, Mo-molybdopterin cofactor biosynthetic process, protein complex assembly, nitrogen fixation and (OBSOLETE) electron transport; Belongs to the NifD/NifK/NifE/NifN family.
 
  
 0.962
nifE
Nitrogenase molybdenum-cofactor synthesis protein NifE; Protein involved in protein binding, oxidoreductase activity, nitrogenase activity, nitrogen compound metabolic process, Mo-molybdopterin cofactor biosynthetic process, protein complex assembly, nitrogen fixation and (OBSOLETE) electron transport; Belongs to the NifD/NifK/NifE/NifN family.
 
  
 0.961
nifH
Nitrogenase iron protein; The key enzymatic reactions in nitrogen fixation are catalyzed by the nitrogenase complex, which has 2 components: the iron protein and the molybdenum-iron protein; Belongs to the NifH/BchL/ChlL family.
 
  
 0.881
nifK
Nitrogenase (molybdenum-iron) beta chain; This molybdenum-iron protein is part of the nitrogenase complex that catalyzes the key enzymatic reactions in nitrogen fixation; Belongs to the NifD/NifK/NifE/NifN family.
 
  
 0.840
nifD
Nitrogenase (molybdenum-iron) alpha chain; Protein involved in (DEPRECATED) molecular function unknown, nitrogenase activity, iron-sulfur cluster binding, oxidoreductase activity, (DEPRECATED) biological process unknown, nitrogen fixation and (OBSOLETE) electron transport.
 
  
 0.835
nifZ
Protein involved in RNA binding, nitrogen compound metabolic process, nitrogen fixation and regulation of transcription, DNA-dependent.
 
   
 0.809
nifQ
Protein involved in molybdenum ion binding, nitrogen compound metabolic process, Mo-molybdopterin cofactor biosynthetic process and nitrogen fixation.
 
  
 0.805
nifY
Nitrogenase molybdenum-cofactor synthesis protein NifX; Protein involved in (DEPRECATED) molecular function unknown and (DEPRECATED) biological process unknown.
 
     0.798
nifT
Protein involved in (DEPRECATED) molecular function unknown, (DEPRECATED) biological process unknown and nitrogen fixation.
 
  
 0.796
nifB
FeMo cofactor biosynthesis protein NifB; Protein involved in catalytic activity, iron-sulfur cluster binding, metal ion binding, nitrogen compound metabolic process, coenzyme biosynthetic process and nitrogen fixation.
 
  
 0.793
Your Current Organism:
Dickeya dadantii
NCBI taxonomy Id: 198628
Other names: D. dadantii 3937, Dickeya dadantii 3937, Dickeya dadantii str. 3937, Dickeya dadantii strain 3937, Erwinia chrysanthemi str. 3937, Pectobacterium chrysanthemi str. 3937
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