STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
galRGalactose operon repressor; GalR belongs to the LacI family of transcriptional regulator; Protein involved in transcription repressor activity, transcription factor activity, carbohydrate catabolic process, transcription and regulation of transcription, DNA-dependent. (336 aa)    
Predicted Functional Partners:
galT
Galactose-1-phosphate uridylyltransferase; Protein involved in (OBSOLETE) cell surface antigen activity, host-interacting, UDP-glucose:hexose-1-phosphate uridylyltransferase activity, galactose metabolic process, carbohydrate catabolic process, colanic acid biosynthetic process and response to desiccation.
 
   
 0.681
gltB
Glutamate synthase, large subunit; Protein involved in glutamate synthase activity, oxidoreductase activity, catalytic activity, glutamate biosynthetic process, nitrogen compound metabolic process and metabolic process.
    
 
 0.671
galM
Aldose 1-epimerase; Converts alpha-aldose to the beta-anomer.
     
 0.583
galE
UDP-glucose-4-epimerase; Protein involved in (OBSOLETE) cell surface antigen activity, host-interacting, UDP-glucose 4-epimerase activity, catalytic activity, coenzyme binding, galactose metabolic process, colanic acid biosynthetic process, carbohydrate catabolic process, NAD biosynthetic process, response to desiccation and cellular metabolic process; Belongs to the NAD(P)-dependent epimerase/dehydratase family.
  
 
 0.505
fruR
DNA-binding transcriptional dual regulator; FruR binds fructose as an inducer; FruR belongs to the LacI family of transcriptional regulators; Protein involved in transcription repressor activity, transcription factor activity, DNA binding, glycolysis, transcription, regulation of transcription, DNA-dependent, response to fructose stimulus and regulation of transcription.
  
   
0.435
galK
Galactokinase; Catalyzes the transfer of the gamma-phosphate of ATP to D- galactose to form alpha-D-galactose-1-phosphate (Gal-1-P). Belongs to the GHMP kinase family. GalK subfamily.
  
  
 0.410
Your Current Organism:
Dickeya dadantii
NCBI taxonomy Id: 198628
Other names: D. dadantii 3937, Dickeya dadantii 3937, Dickeya dadantii str. 3937, Dickeya dadantii strain 3937, Erwinia chrysanthemi str. 3937, Pectobacterium chrysanthemi str. 3937
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