STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADN00004.1Dihydrodipicolinate synthase; Protein involved in lyase activity, catalytic activity and metabolic process; Belongs to the DapA family. (294 aa)    
Predicted Functional Partners:
dapB
Dihydrodipicolinate reductase; Catalyzes the conversion of 4-hydroxy-tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate; Belongs to the DapB family.
 
 
 0.984
thrA
Bifunctional aspartokinase I/homoserine dehydrogenase I; Protein involved in aspartate kinase activity, homoserine dehydrogenase activity, amino acid binding, threonine biosynthetic process, homoserine biosynthetic process, amino acid biosynthetic process, aspartate family amino acid biosynthetic process and metabolic process.
  
 
 0.944
metL
Bifunctional aspartokinase/homoserine dehydrogenase; Protein involved in aspartate kinase activity, homoserine dehydrogenase activity, methionine biosynthetic process, homoserine biosynthetic process, amino acid biosynthetic process and aspartate family amino acid biosynthetic process.
  
 
 0.944
asd
Aspartate-semialdehyde dehydrogenase, NAD(P)-binding protein; Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L-aspartyl- 4-phosphate; Belongs to the aspartate-semialdehyde dehydrogenase family.
  
 
 0.934
ADN00006.1
Protein involved in carbohydrate catabolic process.
 
     0.762
ADN00008.1
Oxidoreductase, short chain dehydrogenase/reductase family; Protein involved in oxidoreductase activity and metabolic process.
 
    0.724
ADN00005.1
Sodium-solute symporter, putative; Protein involved in transporter activity and transport; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
  
  
 0.671
ADN00007.1
Protein involved in (DEPRECATED) molecular function unknown and (DEPRECATED) biological process unknown.
  
  
 0.668
virA
Protein involved in catalytic activity, diaminopimelate decarboxylase activity and lysine biosynthetic process via diaminopimelate.
  
 0.658
ADN00003.1
Alcohol dehydrogenase; Protein involved in oxidoreductase activity, metal ion binding and metabolic process.
 
    0.633
Your Current Organism:
Dickeya dadantii
NCBI taxonomy Id: 198628
Other names: D. dadantii 3937, Dickeya dadantii 3937, Dickeya dadantii str. 3937, Dickeya dadantii strain 3937, Erwinia chrysanthemi str. 3937, Pectobacterium chrysanthemi str. 3937
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