STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADM96746.1Capsular polysaccharide synthesis enzyme cpsC, polysaccharide export; Protein involved in polysaccharide transmembrane transporter activity and polysaccharide transport. (185 aa)    
Predicted Functional Partners:
ADM96747.1
Capsular polysaccharide synthesis enzyme cpsD, exopolysaccharide synthesis; Protein involved in lipopolysaccharide biosynthetic process.
 
 
 0.996
wcaJ
Predicted UDP-glucose lipid carrier transferase; Protein involved in colanic acid biosynthetic process.
 
  
 0.989
wzc
Tyrosine-protein kinase wzc; Protein involved in colanic acid biosynthetic process, protein modification process and lipopolysaccharide biosynthetic process.
 
 
 0.954
ADM96745.1
Capsular polysaccharide synthesis enzyme cpsB; Protein involved in (DEPRECATED) molecular function unknown and (DEPRECATED) biological process unknown.
 
     0.880
ADM96749.1
Protein involved in (DEPRECATED) molecular function unknown and (DEPRECATED) biological process unknown.
       0.763
ADM96748.1
Hypothetical protein.
       0.749
cpsB
Mannose-1-phosphate guanylyltransferase (GDP); Protein involved in (OBSOLETE) cell surface antigen activity, host-interacting, nucleotidyltransferase activity, colanic acid biosynthetic process, carbohydrate catabolic process, nucleotide-sugar biosynthetic process, response to desiccation, biosynthetic process and polysaccharide metabolic process; Belongs to the mannose-6-phosphate isomerase type 2 family.
 
  
 0.701
ADN00176.1
O-antigen export system, ATP-binding protein; Protein involved in (OBSOLETE) ATP-binding cassette (ABC) transporter activity, nucleotide binding, nucleoside-triphosphatase activity, ATP binding and ATPase activity.
  
  
 0.678
ADN00175.1
O-antigen export system permease protein RfbD; Protein involved in (OBSOLETE) ATP-binding cassette (ABC) transporter activity.
  
  
 0.625
rfbN
O antigen biosynthesis rhamnosyltransferase rfbN; Protein involved in (DEPRECATED) molecular function unknown and (DEPRECATED) biological process unknown.
  
  
 0.588
Your Current Organism:
Dickeya dadantii
NCBI taxonomy Id: 198628
Other names: D. dadantii 3937, Dickeya dadantii 3937, Dickeya dadantii str. 3937, Dickeya dadantii strain 3937, Erwinia chrysanthemi str. 3937, Pectobacterium chrysanthemi str. 3937
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.