STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADM96766.1Cytotoxic protein ccdB; Protein involved in DNA topoisomerase (ATP-hydrolyzing) inhibitor activity and plasmid maintenance. (101 aa)    
Predicted Functional Partners:
ADM99188.1
Putative antitoxin of gyrase inhibiting toxin-antitoxin system.
 
   
 0.790
ADM99176.1
Putative antitoxin of gyrase inhibiting toxin-antitoxin system; Protein involved in (DEPRECATED) molecular function unknown and (DEPRECATED) biological process unknown.
 
   
 0.786
ADM97014.1
Putative antitoxin of gyrase inhibiting toxin-antitoxin system; Protein involved in (DEPRECATED) molecular function unknown and (DEPRECATED) biological process unknown.
 
   
 0.782
ADM96767.1
CcdA protein.
     
 0.782
ADM96768.1
MobC-like protein.
       0.598
ADM96769.1
Protein involved in (DEPRECATED) molecular function unknown, metallopeptidase activity, zinc ion binding, (DEPRECATED) biological process unknown and proteolysis.
       0.568
ADM96764.1
Phage abortive infection protein; Protein involved in RNA binding, RNA-directed DNA polymerase activity and RNA-dependent DNA replication.
       0.466
ADM96765.1
Retron-type reverse transcriptase; Protein involved in (DEPRECATED) molecular function unknown, RNA binding, RNA-directed DNA polymerase activity, serine-type endopeptidase activity, (DEPRECATED) biological process unknown, RNA-dependent DNA replication and proteolysis.
       0.466
Your Current Organism:
Dickeya dadantii
NCBI taxonomy Id: 198628
Other names: D. dadantii 3937, Dickeya dadantii 3937, Dickeya dadantii str. 3937, Dickeya dadantii strain 3937, Erwinia chrysanthemi str. 3937, Pectobacterium chrysanthemi str. 3937
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.