STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ompXOuter membrane protein. (171 aa)    
Predicted Functional Partners:
ydgH
Protein involved in (DEPRECATED) molecular function unknown and (DEPRECATED) biological process unknown.
  
   
 0.796
ydgT
Hemolysin expression modulating protein; Protein involved in (DEPRECATED) molecular function unknown and (DEPRECATED) biological process unknown.
  
   
 0.788
aaeX
Membrane protein of efflux system; Protein involved in (DEPRECATED) molecular function unknown and (DEPRECATED) biological process unknown.
  
     0.774
yqjK
Protein involved in (DEPRECATED) molecular function unknown and (DEPRECATED) biological process unknown.
  
     0.774
yecF
Putative cytoplasmic protein; Protein involved in (DEPRECATED) molecular function unknown and (DEPRECATED) biological process unknown.
  
     0.774
yciC
Predicted inner membrane protein.
  
     0.773
yqjB
Putative membrane protein precursor; Modulates the activity of the EnvZ/OmpR two-component regulatory system, probably by directly modulating EnvZ enzymatic activity and increasing stability of phosphorylated OmpR.
  
     0.773
cpxP
Putative exported protein precursor; Protein involved in transcription and xenobiotic metabolic process.
  
     0.772
yebY
Protein involved in (DEPRECATED) molecular function unknown and (DEPRECATED) biological process unknown.
  
     0.772
yiiQ
Protein involved in (DEPRECATED) molecular function unknown and (DEPRECATED) biological process unknown.
  
     0.771
Your Current Organism:
Dickeya dadantii
NCBI taxonomy Id: 198628
Other names: D. dadantii 3937, Dickeya dadantii 3937, Dickeya dadantii str. 3937, Dickeya dadantii strain 3937, Erwinia chrysanthemi str. 3937, Pectobacterium chrysanthemi str. 3937
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.