STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ycgBProtein involved in (DEPRECATED) molecular function unknown and (DEPRECATED) biological process unknown. (511 aa)    
Predicted Functional Partners:
yeaG
Conserved protein with nucleoside triphosphate hydrolase domain; Protein involved in (DEPRECATED) molecular function unknown and (DEPRECATED) biological process unknown.
 
  
 0.982
yeaH
Protein involved in (DEPRECATED) molecular function unknown and (DEPRECATED) biological process unknown; Belongs to the UPF0229 family.
 
  
 0.978
ADM99972.1
Protein involved in (DEPRECATED) molecular function unknown and (DEPRECATED) biological process unknown.
   
  
 0.603
yqjD
Protein involved in (DEPRECATED) molecular function unknown and (DEPRECATED) biological process unknown.
   
    0.542
blc
Outer membrane lipoprotein blc precursor; Involved in the storage or transport of lipids necessary for membrane maintenance under stressful conditions. Displays a binding preference for lysophospholipids.
   
    0.499
uspB
Protein involved in response to stress and xenobiotic metabolic process.
   
  
 0.490
ADM96950.1
Protein involved in electron carrier activity, oxidoreductase activity, iron-sulfur cluster binding, catalytic activity, thiamin pyrophosphate binding, iron ion binding, oxidoreductase activity, acting on the aldehyde or oxo group of donors, tricarboxylic acid cycle, fermentation and (OBSOLETE) electron transport.
   
  
 0.420
phoH
Conserved protein with nucleoside triphosphate hydrolase domain; PhoB-dependent, ATP-binding pho regulon component; may be helicase; induced by P starvation; Protein involved in ATP binding, phosphorus metabolic process, response to starvation and cellular response to phosphate starvation.
   
    0.416
Your Current Organism:
Dickeya dadantii
NCBI taxonomy Id: 198628
Other names: D. dadantii 3937, Dickeya dadantii 3937, Dickeya dadantii str. 3937, Dickeya dadantii strain 3937, Erwinia chrysanthemi str. 3937, Pectobacterium chrysanthemi str. 3937
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.