STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
expRDNA-binding transcriptional regulatory protein ExpR; Functions as an OHLL responsive transcriptional regulator that acts in virulence (soft rot disease) through the activation of genes for plant tissue macerating enzymes. (250 aa)    
Predicted Functional Partners:
expI
Homoserine lactone synthase YpeI; Required for the synthesis of OHHL (N-(3-oxohexanoyl)-L- homoserine lactone), an autoinducer molecule which binds to ExpR and thus acts in virulence (soft rot disease) through the activation of genes for plant tissue macerating enzymes.
 
 
 0.997
ADM99521.1
Putative fimbrial biogenesis protein precursor; Protein involved in (DEPRECATED) molecular function unknown, binding and (DEPRECATED) biological process unknown.
  
    0.528
ADM96826.1
Protein involved in transposase activity and DNA binding.
  
     0.486
ADM97652.1
Transcriptional regulator ahyR/asaR family; This protein contains an acyl homoserine lactone binding domain; Protein involved in transcription factor activity, sequence-specific DNA binding, transcription and regulation of transcription, DNA-dependent.
 
 
0.481
barA
Hybrid sensory histidine kinase, in two-component regulatory system with UvrY; The sensor-histidine kinase BarA phosphorylates the response regulator UvrY. BarA could monitor some metabolic product that is representative of the prevalent energy status in the medium. The UvrY-BarA two-component regulatory system is also designated ExpA-ExpS in Erwinia carotovora and GacA-GacS in Pseudomonas aeruginosa; Protein involved in transferase activity, transferring phosphorus-containing groups, transmembrane receptor histidine kinase activity, phosphotransferase activity, nitrogenous group as ac [...]
  
  
 0.477
ycbL
Predicted metal-binding enzyme; Protein involved in (DEPRECATED) molecular function unknown, hydrolase activity and (DEPRECATED) biological process unknown.
    
 
 0.475
ADM98742.1
Metallo-beta-lactamase superfamily protein; Protein involved in (DEPRECATED) molecular function unknown, hydrolase activity and (DEPRECATED) biological process unknown.
    
 
 0.475
uvrY
Two-component system, NarL family, invasion response regulator UvrY; This protein belongs to the LuxR family of transcriptional regulators; This protein is phosphorylated by the sensor-histidine kinase BarA; The BarA sensor could monitor some metabolic product that is representative of the prevalent energy status in the medium; Protein involved in transcription activator activity, two-component response regulator activity, transcription factor activity, sequence-specific DNA binding, transcription, regulation of transcription, DNA-dependent, biofilm formation and pathogenesis.
 
 
 0.453
priC
Protein involved in DNA-dependent DNA replication.
  
     0.438
ADM98488.1
Probable lipoprotein; Protein involved in (DEPRECATED) molecular function unknown and (DEPRECATED) biological process unknown.
  
     0.424
Your Current Organism:
Dickeya dadantii
NCBI taxonomy Id: 198628
Other names: D. dadantii 3937, Dickeya dadantii 3937, Dickeya dadantii str. 3937, Dickeya dadantii strain 3937, Erwinia chrysanthemi str. 3937, Pectobacterium chrysanthemi str. 3937
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.