STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ycbXPredicted 2Fe-2S cluster-containing protein; Protein involved in (DEPRECATED) molecular function unknown, electron carrier activity, iron-sulfur cluster binding, catalytic activity, molybdenum ion binding, pyridoxal phosphate binding, (DEPRECATED) biological process unknown and (OBSOLETE) electron transport. (367 aa)    
Predicted Functional Partners:
nuoC
NADH:ubiquinone oxidoreductase, chain C,D; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; In the C-terminal section; belongs to the complex I 49 kDa subunit family.
  
 
 0.957
cysJ
Sulfite reductase, alpha subunit, flavoprotein; Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L-cysteine from sulfate. The flavoprotein component catalyzes the electron flow from NADPH -> FAD -> FMN to the hemoprotein component. Belongs to the NADPH-dependent sulphite reductase flavoprotein subunit CysJ family. In the N-terminal section; belongs to the flavodoxin family.
   
 
 0.942
ADM99929.1
Cytochrome P450; Protein involved in monooxygenase activity, iron ion binding, heme binding and (OBSOLETE) electron transport; Belongs to the cytochrome P450 family.
 
 0.899
ADM99111.1
Putative cytochrome P450 hydroxylase; Protein involved in monooxygenase activity, iron ion binding, heme binding, carbohydrate catabolic process, proteolysis, xenobiotic metabolic process and (OBSOLETE) electron transport; Belongs to the cytochrome P450 family.
  
 0.881
hcr
HCP oxidoreductase, NADH-dependent; Protein involved in (DEPRECATED) molecular function unknown, oxidoreductase activity, electron carrier activity, iron-sulfur cluster binding, (DEPRECATED) biological process unknown and (OBSOLETE) electron transport.
    
 0.880
fre
Flavin reductase; Protein involved in electron carrier activity, oxidoreductase activity and (OBSOLETE) electron transport.
  
 
 0.825
nifU
Iron-sulfur cluster assembly scaffold protein NifU; May be involved in the formation or repair of [Fe-S] clusters present in iron-sulfur proteins.
  
 0.805
ADN00733.1
Pyridine nucleotide-disulfide oxidoreductase family protein; Protein involved in oxidoreductase activity, acting on the CH-NH2 group of donors, NAD or NADP as acceptor, oxidoreductase activity, iron-sulfur cluster binding, electron carrier activity, FAD binding, metabolic process, glutamate biosynthetic process and (OBSOLETE) electron transport.
   
 0.796
nuoA
NADH:ubiquinone oxidoreductase, membrane subunit A; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I subunit 3 family.
   
 
 0.772
nuoM
NADH:ubiquinone oxidoreductase, membrane subunit M; Protein involved in (DEPRECATED) electron donor activity, aerobic respiration and anaerobic respiration.
   
 
 0.756
Your Current Organism:
Dickeya dadantii
NCBI taxonomy Id: 198628
Other names: D. dadantii 3937, Dickeya dadantii 3937, Dickeya dadantii str. 3937, Dickeya dadantii strain 3937, Erwinia chrysanthemi str. 3937, Pectobacterium chrysanthemi str. 3937
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