STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADM97964.1Conjugative transfer protein TrbF; Protein involved in conjugation. (95 aa)    
Predicted Functional Partners:
ADM97965.1
Conjugative transfer protein TrbI; Protein involved in unidirectional conjugation.
 
   
 0.876
ADM97968.1
Conjugative transfer protein TrbI; Protein involved in (DEPRECATED) molecular function unknown, (DEPRECATED) biological process unknown and unidirectional conjugation.
 
   
 0.832
ADM97044.1
Conjugative transfer protein TrbC; virB2 subunits for the pilus for the type IV secretion system.
 
   
 0.811
ADM97045.1
Conjugative transfer protein TrbD; Protein involved in unidirectional conjugation.
 
   
 0.803
ADM97046.1
Conjugative transfer protein TrbE; Protein involved in nucleotide binding, nucleoside-triphosphatase activity and unidirectional conjugation.
 
   
 0.803
ADM97047.1
Conjugal transfer/entry exclusion; Protein involved in unidirectional conjugation.
 
   
 0.802
ADM97048.1
Conjugative transfer protein TrbL; Protein involved in unidirectional conjugation and conjugation with cellular fusion.
 
   
 0.801
ADM97043.1
Conjugative transfer protein TrbB; Protein involved in ATP binding, unidirectional conjugation and transport.
 
   
 0.795
ADM97050.1
Conjugative transfer protein TrbG; Protein involved in unidirectional conjugation.
 
   
 0.795
ADM97021.1
Type IV secretory pathway, protease TraF.
 
     0.786
Your Current Organism:
Dickeya dadantii
NCBI taxonomy Id: 198628
Other names: D. dadantii 3937, Dickeya dadantii 3937, Dickeya dadantii str. 3937, Dickeya dadantii strain 3937, Erwinia chrysanthemi str. 3937, Pectobacterium chrysanthemi str. 3937
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.