STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ycgGProtein involved in (DEPRECATED) molecular function unknown and (DEPRECATED) biological process unknown. (501 aa)    
Predicted Functional Partners:
ADM99568.1
Protein involved in signal transducer activity, transcription factor activity, two-component sensor activity, protein modification process, signal transduction and regulation of transcription, DNA-dependent.
 
 0.989
ADM98788.1
Circadian input kinase A / Phytochrome-like protein; Protein involved in (DEPRECATED) molecular function unknown, signal transducer activity, two-component sensor activity, (DEPRECATED) biological process unknown, signal transduction and regulation of transcription, DNA-dependent.
 
 0.941
yaiC
This protein contains a GGDEF motif; Protein involved in (DEPRECATED) molecular function unknown and (DEPRECATED) biological process unknown.
    0.896
ADN00749.1
Sensory box protein; Protein involved in (DEPRECATED) molecular function unknown, signal transducer activity, two-component sensor activity, (DEPRECATED) biological process unknown, signal transduction and regulation of transcription, DNA-dependent.
 
 0.883
ADN00118.1
Product contains GGDEF domain. Proteins with this domain are involved in c-di-GMP synthesis; Protein involved in (DEPRECATED) molecular function unknown and (DEPRECATED) biological process unknown.
    0.880
yfiN
Protein involved in (DEPRECATED) molecular function unknown, signal transducer activity, (DEPRECATED) biological process unknown and signal transduction.
    0.876
ADM97319.1
Sensory box/GGDEF family protein; Protein involved in (DEPRECATED) molecular function unknown and (DEPRECATED) biological process unknown.
    0.870
ADM97698.1
This protein contains a GGDEF domain.
 
 
 0.832
ADM99951.1
GGDEF family protein; Protein involved in (DEPRECATED) molecular function unknown and (DEPRECATED) biological process unknown.
    0.832
yddV
Putative Heme-regulated two-component response regulator; Protein involved in (DEPRECATED) molecular function unknown, iron ion binding, oxygen binding, heme binding and (DEPRECATED) biological process unknown.
    0.827
Your Current Organism:
Dickeya dadantii
NCBI taxonomy Id: 198628
Other names: D. dadantii 3937, Dickeya dadantii 3937, Dickeya dadantii str. 3937, Dickeya dadantii strain 3937, Erwinia chrysanthemi str. 3937, Pectobacterium chrysanthemi str. 3937
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.