STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADM98011.1Protein involved in (DEPRECATED) molecular function unknown and (DEPRECATED) biological process unknown. (144 aa)    
Predicted Functional Partners:
ADM97977.1
ISCps4, transposase; Protein involved in (DEPRECATED) molecular function unknown, DNA binding, transposase activity, (DEPRECATED) biological process unknown and transposition, DNA-mediated.
  
     0.735
ADM97949.1
Dienelactone hydrolase-like enzyme; Protein involved in (DEPRECATED) molecular function unknown, hydrolase activity and (DEPRECATED) biological process unknown.
  
     0.703
ADM99168.1
ISEch11 transposase; IS110 family; Protein involved in DNA binding, transposase activity and transposition, DNA-mediated.
  
     0.643
ADM99447.1
Putative DNA-binding protein; Protein involved in sequence-specific DNA binding and transcription.
  
     0.615
ADM96950.1
Protein involved in electron carrier activity, oxidoreductase activity, iron-sulfur cluster binding, catalytic activity, thiamin pyrophosphate binding, iron ion binding, oxidoreductase activity, acting on the aldehyde or oxo group of donors, tricarboxylic acid cycle, fermentation and (OBSOLETE) electron transport.
  
  
 0.583
ADM97979.1
ISEch13 OrfAB; IS3/IS150 family; Protein involved in transposase activity, DNA binding and transposition, DNA-mediated.
  
     0.542
uvrB
Excinulease of nucleotide excision repair, DNA damage recognition component; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. Upon binding of the UvrA(2)B(2) complex to a putative damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. I [...]
       0.533
nuoC
NADH:ubiquinone oxidoreductase, chain C,D; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; In the C-terminal section; belongs to the complex I 49 kDa subunit family.
  
  
 0.482
sdhC
Succinate dehydrogenase, membrane subunit, binds cytochrome b556; Protein involved in (DEPRECATED) electron donor activity, succinate dehydrogenase activity, tricarboxylic acid cycle, aerobic respiration, cytochrome complex assembly and (OBSOLETE) electron transport.
   
    0.426
nifL
Nitrogen fixation regulatory protein; Protein involved in signal transducer activity, ATP binding, two-component sensor activity, nitrogen compound metabolic process, nitrogen fixation, acquisition of nutrients from host, signal transduction and regulation of transcription, DNA-dependent.
  
     0.407
Your Current Organism:
Dickeya dadantii
NCBI taxonomy Id: 198628
Other names: D. dadantii 3937, Dickeya dadantii 3937, Dickeya dadantii str. 3937, Dickeya dadantii strain 3937, Erwinia chrysanthemi str. 3937, Pectobacterium chrysanthemi str. 3937
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.