STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADM98742.1Metallo-beta-lactamase superfamily protein; Protein involved in (DEPRECATED) molecular function unknown, hydrolase activity and (DEPRECATED) biological process unknown. (339 aa)    
Predicted Functional Partners:
ADN00494.1
NADH oxidase, putative; Protein involved in oxidoreductase activity, FAD binding, (OBSOLETE) electron transport and cell redox homeostasis.
  
 0.614
ADM98741.1
Putative lysR-family transcriptional regulator; Presence of a putative signal peptide; Protein involved in transcription factor activity, transcription and regulation of transcription, DNA-dependent; Belongs to the LysR transcriptional regulatory family.
  
    0.552
ycbK
Protein involved in (DEPRECATED) molecular function unknown and (DEPRECATED) biological process unknown.
  
    0.527
expR
DNA-binding transcriptional regulatory protein ExpR; Functions as an OHLL responsive transcriptional regulator that acts in virulence (soft rot disease) through the activation of genes for plant tissue macerating enzymes.
    
 
 0.475
Your Current Organism:
Dickeya dadantii
NCBI taxonomy Id: 198628
Other names: D. dadantii 3937, Dickeya dadantii 3937, Dickeya dadantii str. 3937, Dickeya dadantii strain 3937, Erwinia chrysanthemi str. 3937, Pectobacterium chrysanthemi str. 3937
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.