STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ybhRYbhR; Protein involved in (OBSOLETE) ATP-binding cassette (ABC) transporter activity, ATP binding, ATPase activity, coupled to transmembrane movement of substances and transport. (368 aa)    
Predicted Functional Partners:
ybhF
ABC transporter multidrug efflux pump, fused ATP-binding domains; Protein involved in (OBSOLETE) ATP-binding cassette (ABC) transporter activity, nucleotide binding, nucleoside-triphosphatase activity, ATP binding and ATPase activity.
  
 0.989
ybhG
Hypothetical UPF0194 membrane protein ybhG; EmrA domain, multidrug resistance efflux pump; Protein involved in protein transporter activity and protein secretion.
 
  
 0.924
ybhS
Protein involved in (OBSOLETE) ATP-binding cassette (ABC) transporter activity, ATP binding, ATPase activity, coupled to transmembrane movement of substances and transport.
 
  
 
0.791
yadG
Predicted transporter subunit: ATP-binding component of ABC superfamily; Protein involved in (OBSOLETE) ATP-binding cassette (ABC) transporter activity, nucleotide binding, nucleoside-triphosphatase activity, ATP binding and ATPase activity.
 
  
 0.720
yhbG
ATP-binding component of an ABC-type LPS transporter complex; Protein involved in (OBSOLETE) ATP-binding cassette (ABC) transporter activity, ATP binding, ATPase activity, nucleotide binding and nucleoside-triphosphatase activity.
   
  0.568
ADM98091.1
Probable RND efflux membrane fusion protein; Protein involved in (DEPRECATED) molecular function unknown, protein transporter activity, (DEPRECATED) biological process unknown and protein secretion.
 
  
 0.564
cysA
Sulfate/thiosulfate transporter subunit; Part of the ABC transporter complex CysAWTP involved in sulfate/thiosulfate import. Responsible for energy coupling to the transport system.
 
 
 
  0.564
ycaO
Protein involved in (DEPRECATED) molecular function unknown and (DEPRECATED) biological process unknown.
  
  
 0.540
ybhO
Cardiolipin synthetase; Catalyzes the phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol.
       0.539
ybhP
Endonuclease/Exonuclease/phosphatase family protein; Protein involved in (DEPRECATED) molecular function unknown and (DEPRECATED) biological process unknown.
       0.538
Your Current Organism:
Dickeya dadantii
NCBI taxonomy Id: 198628
Other names: D. dadantii 3937, Dickeya dadantii 3937, Dickeya dadantii str. 3937, Dickeya dadantii strain 3937, Erwinia chrysanthemi str. 3937, Pectobacterium chrysanthemi str. 3937
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