Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ADM96445.1 | yedX | Dda3937_00225 | Dda3937_02652 | Oxidoreductase, molybdopterin-binding protein; Protein involved in (DEPRECATED) molecular function unknown, (DEPRECATED) biological process unknown and (OBSOLETE) electron transport. | Transthyretin-like protein precursor; Protein involved in (DEPRECATED) molecular function unknown, steroid binding, (DEPRECATED) biological process unknown and transport; Belongs to the transthyretin family. 5-hydroxyisourate hydrolase subfamily. | 0.526 |
| ADM96445.1 | yedZ | Dda3937_00225 | Dda3937_04030 | Oxidoreductase, molybdopterin-binding protein; Protein involved in (DEPRECATED) molecular function unknown, (DEPRECATED) biological process unknown and (OBSOLETE) electron transport. | Conserved inner membrane protein; Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. MsrQ provides electrons for reduction to the reductase catalytic subunit Msr [...] | 0.857 |
| accB | accC | Dda3937_04028 | Dda3937_01600 | Acetyl CoA carboxylase, BCCP subunit; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA. | acetyl-CoA carboxylase, biotin carboxylase subunit; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA. | 0.999 |
| accB | aroQ | Dda3937_04028 | Dda3937_04029 | Acetyl CoA carboxylase, BCCP subunit; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA. | 3-dehydroquinate dehydratase; Catalyzes a trans-dehydration via an enolate intermediate. Belongs to the type-II 3-dehydroquinase family. | 0.779 |
| accB | yedZ | Dda3937_04028 | Dda3937_04030 | Acetyl CoA carboxylase, BCCP subunit; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA. | Conserved inner membrane protein; Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. MsrQ provides electrons for reduction to the reductase catalytic subunit Msr [...] | 0.422 |
| accC | accB | Dda3937_01600 | Dda3937_04028 | acetyl-CoA carboxylase, biotin carboxylase subunit; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA. | Acetyl CoA carboxylase, BCCP subunit; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA. | 0.999 |
| accC | aroQ | Dda3937_01600 | Dda3937_04029 | acetyl-CoA carboxylase, biotin carboxylase subunit; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA. | 3-dehydroquinate dehydratase; Catalyzes a trans-dehydration via an enolate intermediate. Belongs to the type-II 3-dehydroquinase family. | 0.718 |
| accC | yedZ | Dda3937_01600 | Dda3937_04030 | acetyl-CoA carboxylase, biotin carboxylase subunit; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA. | Conserved inner membrane protein; Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. MsrQ provides electrons for reduction to the reductase catalytic subunit Msr [...] | 0.411 |
| aroQ | accB | Dda3937_04029 | Dda3937_04028 | 3-dehydroquinate dehydratase; Catalyzes a trans-dehydration via an enolate intermediate. Belongs to the type-II 3-dehydroquinase family. | Acetyl CoA carboxylase, BCCP subunit; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA. | 0.779 |
| aroQ | accC | Dda3937_04029 | Dda3937_01600 | 3-dehydroquinate dehydratase; Catalyzes a trans-dehydration via an enolate intermediate. Belongs to the type-II 3-dehydroquinase family. | acetyl-CoA carboxylase, biotin carboxylase subunit; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA. | 0.718 |
| aroQ | yedZ | Dda3937_04029 | Dda3937_04030 | 3-dehydroquinate dehydratase; Catalyzes a trans-dehydration via an enolate intermediate. Belongs to the type-II 3-dehydroquinase family. | Conserved inner membrane protein; Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. MsrQ provides electrons for reduction to the reductase catalytic subunit Msr [...] | 0.505 |
| emrE | indC | Dda3937_02465 | Dda3937_00972 | Quaternary ammonium compound-resistance protein; Protein involved in response to drug. | Indigoidine synthase; Protein involved in catalytic activity, cofactor binding, hydrolase activity, acting on ester bonds, ligase activity, antibiotic biosynthetic process, response to defenses of other organism during symbiotic interaction, nonribosomal peptide biosynthetic process, metabolic process, biosynthetic process and pathogenesis. | 0.474 |
| emrE | yedY | Dda3937_02465 | Dda3937_04444 | Quaternary ammonium compound-resistance protein; Protein involved in response to drug. | Predicted reductase; Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) [...] | 0.647 |
| emrE | yedZ | Dda3937_02465 | Dda3937_04030 | Quaternary ammonium compound-resistance protein; Protein involved in response to drug. | Conserved inner membrane protein; Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. MsrQ provides electrons for reduction to the reductase catalytic subunit Msr [...] | 0.647 |
| indC | emrE | Dda3937_00972 | Dda3937_02465 | Indigoidine synthase; Protein involved in catalytic activity, cofactor binding, hydrolase activity, acting on ester bonds, ligase activity, antibiotic biosynthetic process, response to defenses of other organism during symbiotic interaction, nonribosomal peptide biosynthetic process, metabolic process, biosynthetic process and pathogenesis. | Quaternary ammonium compound-resistance protein; Protein involved in response to drug. | 0.474 |
| indC | yedY | Dda3937_00972 | Dda3937_04444 | Indigoidine synthase; Protein involved in catalytic activity, cofactor binding, hydrolase activity, acting on ester bonds, ligase activity, antibiotic biosynthetic process, response to defenses of other organism during symbiotic interaction, nonribosomal peptide biosynthetic process, metabolic process, biosynthetic process and pathogenesis. | Predicted reductase; Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) [...] | 0.461 |
| indC | yedZ | Dda3937_00972 | Dda3937_04030 | Indigoidine synthase; Protein involved in catalytic activity, cofactor binding, hydrolase activity, acting on ester bonds, ligase activity, antibiotic biosynthetic process, response to defenses of other organism during symbiotic interaction, nonribosomal peptide biosynthetic process, metabolic process, biosynthetic process and pathogenesis. | Conserved inner membrane protein; Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. MsrQ provides electrons for reduction to the reductase catalytic subunit Msr [...] | 0.461 |
| yedX | ADM96445.1 | Dda3937_02652 | Dda3937_00225 | Transthyretin-like protein precursor; Protein involved in (DEPRECATED) molecular function unknown, steroid binding, (DEPRECATED) biological process unknown and transport; Belongs to the transthyretin family. 5-hydroxyisourate hydrolase subfamily. | Oxidoreductase, molybdopterin-binding protein; Protein involved in (DEPRECATED) molecular function unknown, (DEPRECATED) biological process unknown and (OBSOLETE) electron transport. | 0.526 |
| yedX | yedY | Dda3937_02652 | Dda3937_04444 | Transthyretin-like protein precursor; Protein involved in (DEPRECATED) molecular function unknown, steroid binding, (DEPRECATED) biological process unknown and transport; Belongs to the transthyretin family. 5-hydroxyisourate hydrolase subfamily. | Predicted reductase; Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) [...] | 0.529 |
| yedX | yedZ | Dda3937_02652 | Dda3937_04030 | Transthyretin-like protein precursor; Protein involved in (DEPRECATED) molecular function unknown, steroid binding, (DEPRECATED) biological process unknown and transport; Belongs to the transthyretin family. 5-hydroxyisourate hydrolase subfamily. | Conserved inner membrane protein; Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. MsrQ provides electrons for reduction to the reductase catalytic subunit Msr [...] | 0.581 |
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