STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hrcCType III secretion outermembrane pore forming protein (YscC,MxiD,HrcC, InvG); E. coli containing D. dadantii hrp cluster is capable of secreting an exogenous effector into tobacco, eliciting a hypersensitive response; Protein involved in protein secretion by the type III secretion system, interaction with host via protein secreted by type III secretion system, protein secretion and pathogenesis. (689 aa)    
Predicted Functional Partners:
hrcT
Type III secretion inner membrane protein; E. coli containing D. dadantii hrp cluster is capable of secreting an exogenous effector into tobacco, eliciting a hypersensitive response; Protein involved in protein secretion by the type III secretion system, interaction with host via protein secreted by type III secretion system, protein targeting, transport and pathogenesis.
 
 
 0.967
hrcJ
Type III secretion bridge between inner and outermembrane lipoprotein (YscJ,HrcJ,EscJ, PscJ); E. coli containing D. dadantii hrp cluster is capable of secreting an exogenous effector into tobacco, eliciting a hypersensitive response; Protein involved in pellicle formation, protein secretion, interaction with host via protein secreted by type III secretion system and pathogenesis.
 
 
 0.957
hrcR
Type III secretion inner membrane protein; E. coli containing D. dadantii hrp cluster is capable of secreting an exogenous effector into tobacco, eliciting a hypersensitive response; Protein involved in protein secretion by the type III secretion system, interaction with host via protein secreted by type III secretion system, protein secretion, protein transport and pathogenesis.
 
 
 0.948
hrcV
Type III secretion inner membrane channel protein (LcrD,HrcV,EscV,SsaV); E. coli containing D. dadantii hrp cluster is capable of secreting an exogenous effector into tobacco, eliciting a hypersensitive response; Protein involved in protein secretion by the type III secretion system, interaction with host via protein secreted by type III secretion system, protein secretion, protein transport and pathogenesis.
 
 
 0.943
hrcS
Type III secretion inner membrane protein; E. coli containing D. dadantii hrp cluster is capable of secreting an exogenous effector into tobacco, eliciting a hypersensitive response; Protein involved in protein secretion by the type III secretion system, interaction with host via protein secreted by type III secretion system, protein secretion, transport and pathogenesis.
 
 
 0.913
hrpJ
Type III secretion protein; E. coli containing D. dadantii hrp cluster is capable of secreting an exogenous effector into tobacco, eliciting a hypersensitive response; Protein involved in protein secretion by the type III secretion system, interaction with host via protein secreted by type III secretion system, pathogenesis, secretion and negative regulation of protein secretion.
 
  
 0.868
hrpG
HrpG precursor; E. coli containing D. dadantii hrp cluster is capable of secreting an exogenous effector into tobacco, eliciting a hypersensitive response; Protein involved in protein secretion by the type III secretion system, interaction with host via protein secreted by type III secretion system and pathogenesis.
     
 0.865
hrpF
HrpF; E. coli containing D. dadantii hrp cluster is capable of secreting an exogenous effector into tobacco, eliciting a hypersensitive response; Protein involved in protein secretion by the type III secretion system, interaction with host via protein secreted by type III secretion system and pathogenesis.
     
 0.834
outC
General secretion pathway protein C; Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins. Required for the translocation of the multiple pectic enzymes.
  
 
 0.826
hrcU
Type III secretion inner membrane protein; E. coli containing D. dadantii hrp cluster is capable of secreting an exogenous effector into tobacco, eliciting a hypersensitive response; Protein involved in protein secretion by the type III secretion system, interaction with host via protein secreted by type III secretion system, protein secretion, transport and pathogenesis.
 
 
 0.816
Your Current Organism:
Dickeya dadantii
NCBI taxonomy Id: 198628
Other names: D. dadantii 3937, Dickeya dadantii 3937, Dickeya dadantii str. 3937, Dickeya dadantii strain 3937, Erwinia chrysanthemi str. 3937, Pectobacterium chrysanthemi str. 3937
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.