STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADM97753.1ABC transporter, ATP-binding protein, MsbA family; Protein involved in (DEPRECATED) molecular function unknown, ATP binding, ATPase activity, nucleotide binding, nucleoside-triphosphatase activity and (DEPRECATED) biological process unknown. (559 aa)    
Predicted Functional Partners:
ADM99566.1
Protein involved in (OBSOLETE) ATP-binding cassette (ABC) transporter activity, ATP binding, ATPase activity, nucleotide binding, nucleoside-triphosphatase activity, peptidase activity, ATPase activity, coupled to transmembrane movement of substances, proteolysis and transport.
 
 
 
0.676
dnaK
Chaperone protein DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family.
  
 0.672
copA
Lead, cadmium, zinc and mercury transporting ATPase; Protein involved in ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism, ATP binding, copper-exporting ATPase activity, metal ion binding, hydrolase activity, hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances, catalytic activity, metal ion transmembrane transporter activity, transport, copper ion transport, metal ion transport and metabolic process.
 
  
 0.506
hscA
Chaperone protein hscA; Chaperone involved in the maturation of iron-sulfur cluster- containing proteins. Has a low intrinsic ATPase activity which is markedly stimulated by HscB. Involved in the maturation of IscU.
  
 0.503
yadG
Predicted transporter subunit: ATP-binding component of ABC superfamily; Protein involved in (OBSOLETE) ATP-binding cassette (ABC) transporter activity, nucleotide binding, nucleoside-triphosphatase activity, ATP binding and ATPase activity.
 
0.467
thrS
threonyl-tRNA synthetase; Catalyzes the attachment of threonine to tRNA(Thr) in a two- step reaction: L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr).
 
 
 0.466
rpsK
30S ribosomal subunit protein S11; Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine- Dalgarno cleft in the 70S ribosome; Belongs to the universal ribosomal protein uS11 family.
  
 
   0.462
ADM98796.1
Putative glutathione transporter, ATP-binding component; Protein involved in (OBSOLETE) ATP-binding cassette (ABC) transporter activity, ATP binding, ATPase activity, nucleotide binding and nucleoside-triphosphatase activity.
  
     0.446
rplN
50S ribosomal subunit protein L14; Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome; Belongs to the universal ribosomal protein uL14 family.
  
     0.444
ybhF
ABC transporter multidrug efflux pump, fused ATP-binding domains; Protein involved in (OBSOLETE) ATP-binding cassette (ABC) transporter activity, nucleotide binding, nucleoside-triphosphatase activity, ATP binding and ATPase activity.
  
0.434
Your Current Organism:
Dickeya dadantii
NCBI taxonomy Id: 198628
Other names: D. dadantii 3937, Dickeya dadantii 3937, Dickeya dadantii str. 3937, Dickeya dadantii strain 3937, Erwinia chrysanthemi str. 3937, Pectobacterium chrysanthemi str. 3937
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