STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADM98045.1Transcriptional regulator; Protein involved in (DEPRECATED) molecular function unknown, transcription factor activity, sequence-specific DNA binding, DNA binding, (DEPRECATED) biological process unknown, regulation of transcription, DNA-dependent and regulation of transcription. (254 aa)    
Predicted Functional Partners:
ADM98047.1
Transcriptional regulator, AraC family; Protein involved in transcription factor activity, sequence-specific DNA binding, DNA binding, regulation of transcription, DNA-dependent, transcription and regulation of transcription.
 
   0.701
ADM97722.1
Transcriptional regulator, AraC family; Protein involved in transcription factor activity, sequence-specific DNA binding, DNA binding, regulation of transcription, DNA-dependent, transcription and regulation of transcription.
  
   0.656
ADN00015.1
Putative transcriptional regulator; Protein involved in transcription factor activity, sequence-specific DNA binding, DNA binding, transcription, regulation of transcription, DNA-dependent and regulation of transcription.
  
     0.654
ADM99315.1
L-rhamnose operon transcriptional activator rhaR; Protein involved in transcription factor activity, sequence-specific DNA binding, DNA binding, transcription, regulation of transcription, DNA-dependent and regulation of transcription.
  
     0.651
ADM97961.1
Transcriptional regulator, AraC family; Protein involved in transcription factor activity, sequence-specific DNA binding, DNA binding, transcription, regulation of transcription, DNA-dependent and regulation of transcription.
  
     0.626
ytfF
Integral membrane protein; Protein involved in (DEPRECATED) molecular function unknown and (DEPRECATED) biological process unknown.
       0.620
ADM97746.1
Right origin-binding protein; There is 2 Rob orthologs in Erwinia chrysanthemi (IDs 15162 and 15785); Protein involved in transcription factor activity, sequence-specific DNA binding, DNA binding, transcription, regulation of transcription, DNA-dependent and regulation of transcription.
  
     0.597
vfmE
VfmE belongs to the AraC family of transcriptional regulators; Protein involved in transcription factor activity, sequence-specific DNA binding, DNA binding, transcription, regulation of transcription, DNA-dependent, metabolism by symbiont of substance in host, regulation of transcription and pathogenesis.
  
     0.588
rhaR
DNA-binding protein transcriptional activator, L-rhamnose-binding protein; Activates expression of the rhaSR operon in response to L- rhamnose.
 
 
 0.585
ADN00336.1
Transcriptional regulator; Protein involved in transcription factor activity, sequence-specific DNA binding, ATP binding, transcription factor binding and regulation of transcription, DNA-dependent.
  
     0.471
Your Current Organism:
Dickeya dadantii
NCBI taxonomy Id: 198628
Other names: D. dadantii 3937, Dickeya dadantii 3937, Dickeya dadantii str. 3937, Dickeya dadantii strain 3937, Erwinia chrysanthemi str. 3937, Pectobacterium chrysanthemi str. 3937
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.