STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCPUP00000000044annotation not available (138 aa)    
Predicted Functional Partners:
PPP2CA
Serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform.
    
  0.505
PPP2CB
Protein phosphatase 2 catalytic subunit beta.
    
  0.505
PPP2R5A
Protein phosphatase 2 regulatory subunit B'alpha.
    
 0.457
PPP2R5E
Protein phosphatase 2 regulatory subunit B'epsilon.
    
 0.457
PPP2R5C
Protein phosphatase 2 regulatory subunit B'gamma.
    
 0.457
PPP2R5D
Protein phosphatase 2 regulatory subunit B'delta.
    
 0.457
ZFP36L1
ZFP36 ring finger protein like 1.
   
  
 0.433
MAPK1
Mitogen-activated protein kinase 1.
    
 0.431
MAPK7
Mitogen-activated protein kinase 7.
    
 0.431
MAPK11
Mitogen-activated protein kinase 11.
    
 0.405
Your Current Organism:
Calidris pugnax
NCBI taxonomy Id: 198806
Other names: C. pugnax, Machetes pugnax, Pavoncella pugnax, Philomachus pugnax, ruff
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.