STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACSBG1acyl-CoA synthetase bubblegum family member 1. (698 aa)    
Predicted Functional Partners:
ACSL3
acyl-CoA synthetase long chain family member 3.
  
 
0.877
FASN
Fatty acid synthase.
   
 0.876
ACSL4
acyl-CoA synthetase long chain family member 4.
  
 
0.876
PPT1
Palmitoyl-protein thioesterase 1-like.
    
 0.864
ACSL1
acyl-CoA synthetase long chain family member 1.
  
 
 
0.861
ACSL5
acyl-CoA synthetase long chain family member 5.
  
 
0.860
LPL
Lipoprotein lipase.
    
  0.849
MGLL
Monoglyceride lipase.
    
 0.847
LIPG
Lipase G, endothelial type.
    
  0.844
LIPC
Lipase C, hepatic type.
    
  0.844
Your Current Organism:
Calidris pugnax
NCBI taxonomy Id: 198806
Other names: C. pugnax, Machetes pugnax, Pavoncella pugnax, Philomachus pugnax, ruff
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.