STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCPUP00000000159annotation not available (317 aa)    
Predicted Functional Partners:
UBE2V1
Ubiquitin-conjugating enzyme E2 variant 1.
     
 0.844
LOC106893757
BRCA1-associated RING domain protein 1-like.
    
 0.821
ENSCPUP00000025694
annotation not available
    
 0.821
PLA2G15
Phospholipase A2 group XV.
     
 0.786
CYP2U1
Cytochrome P450 2U1.
    
 0.778
LOC106896096
Cytochrome P450 2C5-like.
    
  0.768
ENSCPUP00000027786
annotation not available
     
 0.766
PLA2G6
Phospholipase A2 group VI.
     
 0.763
PLA2G12A
Phospholipase A2 group XIIA.
     
 0.760
PLA2G2E
Group IIE secretory phospholipase A2-like.
     
 0.757
Your Current Organism:
Calidris pugnax
NCBI taxonomy Id: 198806
Other names: C. pugnax, Machetes pugnax, Pavoncella pugnax, Philomachus pugnax, ruff
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.