STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SLC26A7Solute carrier family 26 member 7. (656 aa)    
Predicted Functional Partners:
ENSCPUP00000002614
annotation not available
    
 0.796
LOC106900355
Heme-binding protein 1-like.
    
 0.791
SLC4A2
Solute carrier family 4 member 2.
     
 0.772
MRE11
MRE11 homolog, double strand break repair nuclease.
  
  0.764
SLC4A3
Solute carrier family 4 member 3.
     
 0.725
SLC4A1
Solute carrier family 4 member 1 (Diego blood group).
     
 0.725
RXFP1
Relaxin family peptide receptor 1.
   
 
 0.686
LOC106895671
Relaxin receptor 1-like.
   
 
 0.686
LGR5
Leucine rich repeat containing G protein-coupled receptor 5.
     
 0.678
LGR4
Leucine rich repeat containing G protein-coupled receptor 4.
     
 0.676
Your Current Organism:
Calidris pugnax
NCBI taxonomy Id: 198806
Other names: C. pugnax, Machetes pugnax, Pavoncella pugnax, Philomachus pugnax, ruff
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.