STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GRIA4Glutamate ionotropic receptor AMPA type subunit 4. (902 aa)    
Predicted Functional Partners:
GRIA2
Glutamate ionotropic receptor AMPA type subunit 2.
  
0.996
GRIA3
Glutamate ionotropic receptor AMPA type subunit 3.
  
 
0.978
GRIA1
Glutamate ionotropic receptor AMPA type subunit 1.
  
0.973
CACNG3
Calcium voltage-gated channel auxiliary subunit gamma 3.
   
 0.954
GRIN2B
Glutamate ionotropic receptor NMDA type subunit 2B.
   
0.944
GRIN2A
Glutamate ionotropic receptor NMDA type subunit 2A.
   
0.943
GRIN1
Glutamate ionotropic receptor NMDA type subunit 1.
   
0.938
GRIN2C
Glutamate ionotropic receptor NMDA type subunit 2C.
    
0.923
CACNG5
Calcium voltage-gated channel auxiliary subunit gamma 5.
    
 0.914
SHISA9
Shisa family member 9.
     
 0.908
Your Current Organism:
Calidris pugnax
NCBI taxonomy Id: 198806
Other names: C. pugnax, Machetes pugnax, Pavoncella pugnax, Philomachus pugnax, ruff
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.