STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCPUP00000001061annotation not available (398 aa)    
Predicted Functional Partners:
ENSCPUP00000010779
annotation not available
    
 0.583
KCNK1
Potassium two pore domain channel subfamily K member 1.
    
 0.583
KCNE2
Potassium voltage-gated channel subfamily E regulatory subunit 2.
    
 0.581
KCNAB1
Potassium voltage-gated channel subfamily A member regulatory beta subunit 1.
    
 0.525
KCNAB2
Potassium voltage-gated channel subfamily A regulatory beta subunit 2.
    
 0.525
KCNE3
Potassium voltage-gated channel subfamily E regulatory subunit 3.
     
 0.518
KCNE5
Potassium voltage-gated channel subfamily E regulatory subunit 5.
     
 0.472
ENSCPUP00000020777
annotation not available
     
 0.472
KCNE1
Potassium voltage-gated channel subfamily E regulatory subunit 1.
    
 0.463
AKR7L
Aldo-keto reductase family 7 member A2.
    
 0.426
Your Current Organism:
Calidris pugnax
NCBI taxonomy Id: 198806
Other names: C. pugnax, Machetes pugnax, Pavoncella pugnax, Philomachus pugnax, ruff
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.