STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CRIP2Cysteine rich protein 2. (320 aa)    
Predicted Functional Partners:
STK3
Serine/threonine kinase 3.
    
  0.550
STK4
Serine/threonine kinase 4.
    
  0.550
MTUS1
Microtubule associated scaffold protein 1.
    
  0.550
GLIPR2
GLI pathogenesis related 2.
      
 0.483
CXorf56
Chromosome unknown open reading frame, human CXorf56.
      
 0.450
DOK4
Docking protein 4.
      
 0.408
ENSCPUP00000019028
annotation not available
      
 0.407
CLBA1
Clathrin binding box of aftiphilin containing 1.
      
 0.406
ACTN2
Actinin alpha 2.
   
 0.405
LOC106898583
Alpha-actinin-4-like.
   
 0.400
Your Current Organism:
Calidris pugnax
NCBI taxonomy Id: 198806
Other names: C. pugnax, Machetes pugnax, Pavoncella pugnax, Philomachus pugnax, ruff
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.