Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PLP1Proteolipid protein 1. (277 aa)    
Predicted Functional Partners:
MBP
Myelin basic protein.
   
 
 0.992
SLC1A2
Solute carrier family 1 member 2.
   
 
 0.923
TNR
Tenascin R.
   
    0.882
ITGAV
Integrin subunit alpha V.
    
  0.860
ITGB3
Integrin subunit beta 3.
    
  0.847
PTPRN
Protein tyrosine phosphatase receptor type N.
    
   0.841
PTPRN2
Protein tyrosine phosphatase receptor type N2.
    
   0.841
MAPT
Microtubule associated protein tau.
   
 
 0.837
OMG
Oligodendrocyte myelin glycoprotein.
   
 
 0.833
HTT
Huntingtin.
   
   0.817
Your Current Organism:
Calidris pugnax
NCBI taxonomy Id: 198806
Other names: C. pugnax, Machetes pugnax, Pavoncella pugnax, Philomachus pugnax, ruff
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