STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ASPMAbnormal spindle microtubule assembly. (3373 aa)    
Predicted Functional Partners:
KIF23
Kinesin family member 23.
   
 
 0.982
KIF11
Kinesin family member 11.
   
 
 0.980
DLGAP5
DLG associated protein 5.
   
  
 0.975
BUB1B
BUB1 mitotic checkpoint serine/threonine kinase B.
   
 
 0.960
NUF2
NUF2 component of NDC80 kinetochore complex.
   
  
 0.954
KIF15
Kinesin family member 15.
   
  
 0.950
NDC80
NDC80 kinetochore complex component.
   
 
 0.943
BUB1
BUB1 mitotic checkpoint serine/threonine kinase.
   
 
 0.942
KIF17
Kinesin family member 17.
   
 
 0.941
KIF4A
Kinesin family member 4A.
   
  
 0.941
Your Current Organism:
Calidris pugnax
NCBI taxonomy Id: 198806
Other names: C. pugnax, Machetes pugnax, Pavoncella pugnax, Philomachus pugnax, ruff
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.