STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PAPSS13'-phosphoadenosine 5'-phosphosulfate synthase 1. (624 aa)    
Predicted Functional Partners:
FLAD1
Flavin adenine dinucleotide synthetase 1.
  
 0.996
EEF1A2
Eukaryotic translation elongation factor 1 alpha 2.
 
   
 0.937
GSPT1
G1 to S phase transition 1.
 
   
 0.937
EEF1A1
Eukaryotic translation elongation factor 1 alpha 1.
 
   
 0.937
SDHA
Succinate dehydrogenase complex flavoprotein subunit A.
    
 0.909
HBS1L
HBS1 like translational GTPase.
 
      0.900
IMPAD1
Inositol monophosphatase domain containing 1.
  
 
 0.899
BPNT1
3'(2'), 5'-bisphosphate nucleotidase 1.
  
 
 0.899
H6PD
Hexose-6-phosphate dehydrogenase/glucose 1-dehydrogenase.
    
 0.886
COQ3
Coenzyme Q3, methyltransferase.
    
 0.864
Your Current Organism:
Calidris pugnax
NCBI taxonomy Id: 198806
Other names: C. pugnax, Machetes pugnax, Pavoncella pugnax, Philomachus pugnax, ruff
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.