STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NEK7NIMA related kinase 7. (302 aa)    
Predicted Functional Partners:
NEK9
NIMA related kinase 9.
    
0.992
LOC106887227
NACHT, LRR and PYD domains-containing protein 3-like.
    
 0.947
RNH1
Ribonuclease/angiogenin inhibitor 1.
    
 0.870
ANKS3
Ankyrin repeat and sterile alpha motif domain containing 3.
    
 
 0.710
NLRC3
NLR family CARD domain containing 3.
    
 0.702
TRIM14
Tripartite motif containing 14.
    
 0.702
ANKS6
Ankyrin repeat and sterile alpha motif domain containing 6.
    
 
 0.684
NLRC5
NLR family CARD domain containing 5.
    
 0.679
RCC1L
RCC1 like.
    
 0.662
ENSCPUP00000001163
annotation not available
 
      0.659
Your Current Organism:
Calidris pugnax
NCBI taxonomy Id: 198806
Other names: C. pugnax, Machetes pugnax, Pavoncella pugnax, Philomachus pugnax, ruff
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.