STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SVOPLSVOP like. (516 aa)    
Predicted Functional Partners:
AK9
Adenylate kinase 9.
   
 
  0.842
LRGUK
Leucine rich repeats and guanylate kinase domain containing.
     
 0.687
NAPRT
Nicotinate phosphoribosyltransferase.
     
 0.554
MFSD10
Major facilitator superfamily domain containing 10.
   
  
 0.538
MFSD9
Major facilitator superfamily domain containing 9.
      
 0.531
COQ9
Coenzyme Q9.
      
 0.527
R3HCC1
R3H domain and coiled-coil containing 1.
      
 0.517
UNC93A
Unc-93 homolog A.
      
 0.511
NMNAT1
Nicotinamide nucleotide adenylyltransferase 1.
   
 
 0.507
NMNAT3
Nicotinamide nucleotide adenylyltransferase 3.
   
 
 0.507
Your Current Organism:
Calidris pugnax
NCBI taxonomy Id: 198806
Other names: C. pugnax, Machetes pugnax, Pavoncella pugnax, Philomachus pugnax, ruff
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.