STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GLB1Galactosidase beta 1. (652 aa)    
Predicted Functional Partners:
GALNS
Galactosamine (N-acetyl)-6-sulfatase.
   
 0.892
GLA
Galactosidase alpha.
  
 
 0.891
GALM
Galactose mutarotase.
  
 
 0.877
HEXB
Hexosaminidase subunit beta.
  
 
 0.864
GNS
Glucosamine (N-acetyl)-6-sulfatase.
  
 0.862
HEXA
Hexosaminidase subunit alpha.
  
 
 0.861
CTSA
Cathepsin A.
   
 0.852
UGCG
UDP-glucose ceramide glucosyltransferase.
  
 
 0.849
ST3GAL5
ST3 beta-galactoside alpha-2,3-sialyltransferase 5.
   
 
 0.848
B4GALT6
Beta-1,4-galactosyltransferase 6.
     
 0.847
Your Current Organism:
Calidris pugnax
NCBI taxonomy Id: 198806
Other names: C. pugnax, Machetes pugnax, Pavoncella pugnax, Philomachus pugnax, ruff
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.