STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PEBP4Phosphatidylethanolamine binding protein 4. (211 aa)    
Predicted Functional Partners:
MRPL40
Mitochondrial ribosomal protein L40.
   
 
 0.877
MRPL16
Mitochondrial ribosomal protein L16.
   
 0.861
DAP3
Death associated protein 3.
   
 
 0.857
MRPL19
Mitochondrial ribosomal protein L19.
   
 
 0.854
MRPL2
Mitochondrial ribosomal protein L2.
   
 
 0.852
MRPL46
Mitochondrial ribosomal protein L46.
   
 
 0.845
MRPS10
Mitochondrial ribosomal protein S10.
   
 
 0.844
MRPL44
Mitochondrial ribosomal protein L44.
  
 
 0.839
ENSCPUP00000003125
annotation not available
   
 
 0.838
MRPL10
Mitochondrial ribosomal protein L10.
   
 
 0.835
Your Current Organism:
Calidris pugnax
NCBI taxonomy Id: 198806
Other names: C. pugnax, Machetes pugnax, Pavoncella pugnax, Philomachus pugnax, ruff
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.