STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TNFSF8TNF superfamily member 8. (234 aa)    
Predicted Functional Partners:
TNFRSF8
TNF receptor superfamily member 8.
  
 
 0.876
LOC106887662
Tumor necrosis factor receptor superfamily member 1B-like.
   
 
 0.773
TNFSF15
TNF superfamily member 15.
  
   
 0.612
LOC106895106
Inducible T-cell costimulator-like.
  
  
 0.511
CD86
CD86 molecule.
  
  
 0.495
IFNG
Interferon gamma.
  
  
 0.453
TNFRSF1A
TNF receptor superfamily member 1A.
  
   
 0.451
IL7R
Interleukin 7 receptor.
  
  
 0.450
IL20RA
Interleukin 20 receptor subunit alpha.
  
   
 0.449
IL1RL1
Interleukin 1 receptor like 1.
  
   
 0.440
Your Current Organism:
Calidris pugnax
NCBI taxonomy Id: 198806
Other names: C. pugnax, Machetes pugnax, Pavoncella pugnax, Philomachus pugnax, ruff
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.