STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RFC5Replication factor C subunit 5. (211 aa)    
Predicted Functional Partners:
RFC1
Replication factor C subunit 1.
   
 0.999
RFC2
Replication factor C subunit 2.
   
0.999
RFC3
Replication factor C subunit 3.
   
0.999
RAD17
RAD17 checkpoint clamp loader component.
   
 0.999
RFC4
Replication factor C subunit 4.
   
0.999
ATAD5
ATPase family AAA domain containing 5.
   
 0.998
PCNA
Proliferating cell nuclear antigen.
  
 0.998
CHTF18
Chromosome transmission fidelity factor 18.
   
 0.998
DSCC1
DNA replication and sister chromatid cohesion 1.
   
 0.990
ENSCPUP00000015879
annotation not available
   
 0.990
Your Current Organism:
Calidris pugnax
NCBI taxonomy Id: 198806
Other names: C. pugnax, Machetes pugnax, Pavoncella pugnax, Philomachus pugnax, ruff
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.