STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCPUP00000002069annotation not available (171 aa)    
Predicted Functional Partners:
PLA2G1B
Phospholipase A2 group IB.
     
 0.887
LOC106896872
Group 10 secretory phospholipase A2-like.
     
 0.863
PLAAT1
Phospholipase A and acyltransferase 1.
   
 
 0.860
MBOAT1
Membrane bound O-acyltransferase domain containing 1.
     
 0.859
PLA2G10
Phospholipase A2 group X.
     
 0.859
PTGS2
Prostaglandin-endoperoxide synthase 2.
   
 0.856
PTGS1
Prostaglandin-endoperoxide synthase 1.
   
 0.856
PLA2G6
Phospholipase A2 group VI.
     
 0.854
LPCAT3
Lysophosphatidylcholine acyltransferase 3.
     
 0.853
LPCAT1
Lysophosphatidylcholine acyltransferase 1.
    
 0.852
Your Current Organism:
Calidris pugnax
NCBI taxonomy Id: 198806
Other names: C. pugnax, Machetes pugnax, Pavoncella pugnax, Philomachus pugnax, ruff
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.