STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106900163Potassium voltage-gated channel subfamily V member 2-like. (507 aa)    
Predicted Functional Partners:
RPL30
Ribosomal protein L30.
   
 0.812
RPL35
Ribosomal protein L35.
  
 0.812
RPL31
Ribosomal protein L31.
   
 0.811
ENSCPUP00000009726
annotation not available
   
 0.811
RPL23A
Ribosomal protein L23a.
  
 0.811
RPL24
Ribosomal protein L24.
  
 0.810
RPL32
Ribosomal protein L32.
  
 0.810
RPL35A
Ribosomal protein L35a.
   
 0.809
RPLP2
Ribosomal protein lateral stalk subunit P2.
   
 0.801
RPL36AL
Ribosomal protein L36a like.
  
 0.799
Your Current Organism:
Calidris pugnax
NCBI taxonomy Id: 198806
Other names: C. pugnax, Machetes pugnax, Pavoncella pugnax, Philomachus pugnax, ruff
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