STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
YWHAETyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein epsilon. (233 aa)    
Predicted Functional Partners:
YWHAZ
Tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein zeta.
  
0.969
BRAF
B-Raf proto-oncogene, serine/threonine kinase.
   
 0.956
MLF1
Myeloid leukemia factor 1.
    
 
 0.950
RAF1
Raf-1 proto-oncogene, serine/threonine kinase.
   
 0.944
CDC25A
Cell division cycle 25A.
    
 0.938
CDC25B
Cell division cycle 25B.
    
 0.938
YWHAB
Tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein beta.
  
0.935
NDEL1
nudE neurodevelopment protein 1 like 1.
    
 0.930
PAFAH1B1
Platelet activating factor acetylhydrolase 1b regulatory subunit 1.
   
 0.905
YAP1
Yes associated protein 1.
    
 0.895
Your Current Organism:
Calidris pugnax
NCBI taxonomy Id: 198806
Other names: C. pugnax, Machetes pugnax, Pavoncella pugnax, Philomachus pugnax, ruff
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.