STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFRP4Secreted frizzled related protein 4. (327 aa)    
Predicted Functional Partners:
WNT16
Wnt family member 16.
    
 0.911
WNT8A
Wnt family member 8A.
    
 0.909
WNT1
Wnt family member 1.
    
 0.907
WNT9A
Wnt family member 9A.
    
 0.906
WNT5A
Wnt family member 5A.
    
 0.904
WNT5B
Wnt family member 5B.
    
 0.904
WNT6
Wnt family member 6.
    
 0.903
WNT10A
Wnt family member 10A.
    
 0.902
WNT7B
Wnt family member 7B.
    
 0.901
WNT7A
Wnt family member 7A.
    
 0.901
Your Current Organism:
Calidris pugnax
NCBI taxonomy Id: 198806
Other names: C. pugnax, Machetes pugnax, Pavoncella pugnax, Philomachus pugnax, ruff
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.