STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LIN52Lin-52 DREAM MuvB core complex component. (112 aa)    
Predicted Functional Partners:
LIN9
Lin-9 DREAM MuvB core complex component.
    
 0.998
MYBL2
MYB proto-oncogene like 2.
    
 0.994
RBBP4
RB binding protein 4, chromatin remodeling factor.
   
 0.965
ENSCPUP00000000706
annotation not available
    
 0.959
LIN54
Lin-54 DREAM MuvB core complex component.
    
 0.959
RB1
RB transcriptional corepressor 1.
    
 0.959
RBL2
RB transcriptional corepressor like 2.
    
 0.945
RBL1
RB transcriptional corepressor like 1.
    
 0.945
RBBP7
RB binding protein 7, chromatin remodeling factor.
   
 0.941
MYBL1
MYB proto-oncogene like 1.
    
 0.932
Your Current Organism:
Calidris pugnax
NCBI taxonomy Id: 198806
Other names: C. pugnax, Machetes pugnax, Pavoncella pugnax, Philomachus pugnax, ruff
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.