STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FBXO33F-box protein 33. (289 aa)    
Predicted Functional Partners:
CUL1
Cullin 1.
   
 
 0.688
WDR47
WD repeat domain 47.
      
 0.538
FBXL15
F-box and leucine rich repeat protein 15.
      
 0.516
FBXL14
F-box and leucine rich repeat protein 14.
      
 0.503
CUL3
Cullin 3.
   
 
 0.494
FBXL7
F-box and leucine rich repeat protein 7.
      
 0.493
PNN
Pinin, desmosome associated protein.
  
   
 0.433
RB1CC1
RB1 inducible coiled-coil 1.
  
     0.433
FBXO25
F-box protein 25.
      
 0.429
CACUL1
CDK2 associated cullin domain 1.
   
 
 0.428
Your Current Organism:
Calidris pugnax
NCBI taxonomy Id: 198806
Other names: C. pugnax, Machetes pugnax, Pavoncella pugnax, Philomachus pugnax, ruff
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.